First, This ^.
I fished from a 12' jon almost exclusively when we were in NY. Threw it on top of the Jeep Cherokee, without struggling or scratching the wagon. Got a trailer for it a few years ago, and don't use it nearly as much any more (sucks getting old). Anyway, Here's my $.02: Don't try to fish it like a bass boat. You want to either line up and drift with wind/current, anchor, or use the transom trolling motor and back troll (I used a long bamboo calcutta as a power pole, long before there was such a thing). Depending on where and conditions, all can be very effective. Will you wish you were in a bass boat in large water? yeah, but in smaller bodies of water, once you figure it out, it will sometimes be an advantage.